Annonce en lien avec l’Action/le Réseau : aucun
Laboratoire/Entreprise : équipe Bibliome, unité MaIAGe, INRA
Durée : 12 mois
Contact : claire.nedellec@jouy.inra.fr
Date limite de publication : 2017-05-30
Contexte :
Bibliome research team in MaIAGE laboratory (INRA, French Institute for Agronomic Research) has an open software development position in the H2020 OpenMinTeD project for contributing to the joint development of a European infrastructure for text-mining, its use for information extraction in specific domains and its evaluation.
Sujet :
The person hired will contribute to,
– The implementation of the three community driven applications in the Agriculture and Biodiversity domains (microbiology&food, wheat phenotyping and plant developement)
– Their integration into the client applications in bioinformatics infrastructures
– The automatisation of the harvesting and update of document collection and NLP resources (ontologies, nomenclatures, lexicon)
Profil du candidat :
Collaborative and networking and skills are essential; operational experience in European projects will be considered an advantage.
Formation et compétences requises :
Candidates should have
– a Master in Computer Science or in Bioinformatics with emphasis in Software Engineering;
– excellent programming skills (Java, Python);
– an experience in design, adaptation or configuration of pipelines is needed, either bioinformatics (e.g. Galaxy) or NLP (e.g. IUMA)
– an experience in Web Service (e.g. REST) and Web UI development will be appreciated.
– good writing skills (academic English).
Adresse d’emploi :
Period:
———
The starting date will be April 2017 for 12 months (possible extension)
Location: INRA research center in Jouy-en-Josas, near Paris in France.
Salary: Depends on diploma and level of experience. Gross monthly salary for a Master degree is between 2000 € for a beginner and 3000 € for an experienced Software engineer. The benefit package includes partial reimbursement of local transport and lunch, and health and retirement insurance.
Application
————-
Interested candidates should send their resume and a cover letter with OMTD-CDD-0517 reference to
– Claire Nédellec (head of Bibliome research team) (claire.nedellec@jouy.inra.fr)
– Copy to Louise Deléger (louise.deleger@jouy.inra.fr) and Robert Bossy (robert.bossy@jouy.inra.fr)
Links
– OpenMinTeD: http://openminted.eu/
– Bibliome: http://maiage.jouy.inra.fr/?q=fr/bibliome/
– MaIAGE: http://maiage.jouy.inra.fr/
– Bioinformatics platforms:
o Migale: http://migale.jouy.inra.fr/
o URGI: https://urgi.versailles.inra.fr/Tools/GnpIS
o IPS2: http://tools.ips2.u-psud.fr/projects/FLAGdb++/HTML/index.shtml